WGS sample counts for joint-membership TOPMed-CCDG studies by freeze

This page summarizes the number of WGS samples for joint-membership TOPMed-CCDG studies within each TOPMed data freeze.

ARIC, HCHS/SOL, GALAII, BioMe, PROMIS, and several studies in the AFGen consortium and CCDG CVD project are participating in both TOPMed and CCDG programs.

• The AFGen studies participating in both TOPMed and CCDG include MGH_AF, VAFAR, AFLMU, CATHGEN, GENAF, JHU_AF, INSPIRE_AF, MPP, PMBB_AF, UCSF_AF, BioVU_AF, GGAF, and BioMe.
• The CCDG CVD studies participating in both TOPMed and CCDG include BioMe, CATHGEN, PMBB_AF, and BioVU_AF.

As described in the TOPMed-CCDG bidirectional data sharing agreement, both TOPMed and CCDG programs will have access to data for all samples and subjects for joint-membership studies. As a result, please be aware that the samples in this table may appear in both TOPMed program-specific VCFs as well as CCDG program-specific VCFs under different IDs despite having genotype calls derive from a single BAM. This point is described in the FAQ: How do I link TOPMed NWD_IDs to CCDG IDs?