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Whole Genome association testing in 333,100 individuals across three Biobanks identifies rare non-coding single variant and genomic aggregate associations with height

Submitting Author
Li, Zilin
Submitting Author's Email
Authors
Gareth Hawkes, Robin N Beaumont, Zilin Li, Ravi Mandla, Xihao Li, Christine M. Albert, Donna K. Arnett, Allison E. Ashley-Koch, Aneel A. Ashrani, Kathleen C. Barnes, Eric Boerwinkle, Jennifer A. Brody, April P. Carson, Nathalie Chami, Yii-Der Ida Chen, Mina K. Chung, Joanne E. Curran, Dawood Darbar, Patrick T. Ellinor, Myrian Fornage, Victor R. Gordeuk, Xiuqing Guo, Jiang He, Chii-Min Hwu, Rita R. Kalyani, Robert Kaplan, Sharon L.R. Kardia, Charles Kooperberg, Ruth J.F. Loos, Steven A. Lubitz, Ryan L. Minster, Braxton D. Mitchell, Joanne M. Murabito, Nicholette D. Palmer, Bruce M. Psaty, Susan Redline, M. Benjamin Shoemaker, Edwin K. Silverman, Scott T. Weiss, Lisa R. Yanek, Hufeng Zhou, NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, Ching-Ti Liu, Kari E. North, Anne E. Justice, Jon Locke, Nick Owens, Anna Murray, Kashyap Patel, Timothy M. Frayling, Caroline F. Wright, Andrew R. Wood, Xihong Lin, Alisa Manning & Michael N. Weedon
Journal name for most current submission
Nature Genetics
Associated TOPMed paper proposal
This manuscript has been approved by the original paper proposal's Working Group(s) or is "single PI"
This manuscript has been approved by the original paper proposal's Working Group(s) or is "single PI"
Acknowledgments
I have followed instructions for TOPMed Acknowledgments
I've received approval for all data sets used in this manuscript, including adding new data sets and canceling all unused ones.
I've received approval for all data sets used in this manuscript, including adding new data sets and canceling all unused ones.
I have followed the Data Use Limitations for each of the data sets used in this manuscript, if applicable.
Yes
I've included at least 1 co-author from each study used in analysis or the PI declined an offer to have their study represented.
Yes
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Yes
Upload all necessary study-specific approval documentation.
CFS
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CRA
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I've included at least 1 DCC/ACC author, or they declined authorship or deemed acknowledgement sufficient.
I've included at least 1 DCC/ACC author, or they declined authorship or deemed acknowledgement sufficient.
I’ve included at least 1 IRC author, or they declined authorship or deemed acknowledgement sufficient.
I’ve included at least 1 IRC author, or they declined authorship or deemed acknowledgement sufficient.
I've included at least 1 author from relevant omics center(s) or they declined authorship or deemed acknowledgement sufficient.
I've included at least 1 author from relevant omics center(s) or they declined authorship or deemed acknowledgement sufficient.

TOPMed data used in this manuscript

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Parent Study: Consent Group Review Status
ARIC:DS-CVD-IRB Approved automatically after 2 weeks
ARIC:HMB-IRB Approved automatically after 2 weeks
Amish:HMB-IRB-MDS Approved automatically after 2 weeks
BAGS:GRU-IRB Approved automatically after 2 weeks
BioMe:HMB-NPU Approved
CARDIA:HMB-IRB Approved automatically after 2 weeks
CARDIA:HMB-IRB-NPU Approved automatically after 2 weeks
CCAF:GRU-IRB Approved
CFS:DS-HLBS-IRB-NPU Approved automatically after 2 weeks
CHS:HMB-MDS Approved
CHS:HMB-NPU-MDS Approved
COPDGene:HMB Approved
CRA:DS-ASTHMA-IRB-MDS-RD Approved
DHS:HMB-IRB-COL-NPU Approved
ECLIPSE:DS-CS-MDS-RD Request cancelled by original requester
FHS:HMB-IRB-MDS Approved
FHS:HMB-IRB-NPU-MDS Approved
GENOA:DS-ASC-RF-NPU Approved
GOLDN:DS-CVD-IRB Request cancelled by original requester
GenSalt:DS-HCR-IRB Approved automatically after 2 weeks
GeneSTAR:DS-CVD-IRB-NPU-MDS Approved
HCHS_SOL:HMB Approved automatically after 2 weeks
HCHS_SOL:HMB-NPU Approved automatically after 2 weeks
HVH:DS-CVD-IRB-MDS Approved automatically after 2 weeks
HVH:HMB-IRB-MDS Approved automatically after 2 weeks
HyperGEN:GRU-IRB Approved
JHS:DS-FDO-IRB Approved
JHS:DS-FDO-IRB-NPU Approved
JHS:HMB-IRB Approved
JHS:HMB-IRB-NPU Approved
LTRC:HMB-MDS Approved
MESA:HMB Approved
MESA:HMB-NPU Approved
MGH_AF:HMB-IRB Approved automatically after 2 weeks
Mayo_VTE:GRU Approved automatically after 2 weeks
OMG_SCD:DS-SCD-IRB-PUB-COL-MDS-RD Approved
Partners:HMB Approved automatically after 2 weeks
SAFS:DS-DHD-IRB-PUB-MDS-RD Approved
Samoan:GRU-IRB-PUB-COL-NPU-GSO Approved
THRV:DS-CVD-IRB-COL-NPU-RD Approved automatically after 2 weeks
VAFAR:HMB-IRB Approved automatically after 2 weeks
VU_AF:GRU-IRB Approved
WGHS:HMB Approved automatically after 2 weeks
WHI:HMB-IRB Approved
WHI:HMB-IRB-NPU Approved
walk_PHaSST:HMB-IRB-PUB-COL-NPU-MDS-GSO Approved
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