Inherited causes of clonal haematopoiesis in 97,691 whole genomes
| Submitting Author |
Bick, Alexander
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|---|---|
| Submitting Author's Email | |
| Authors |
Alexander G Bick*, Joshua S Weinstock*, Satish K Nandakumar, Charles P Fulco, Matthew J Leventhal, Erik L Bao, Joseph Nasser, Seyedeh M Zekavat, Mindy D Szeto, Cecelia Laurie, Margaret A Taub, Braxton D Mitchell, Kathleen C Barnes, Arden Moscati, Myriam Fornage, Susan Redline, Bruce M Psaty, Edwin K Silverman, Scott T Weiss, Nicholette D Palmer, Ramachandran S Vasan, Esteban G Burchard, Sharon LR Kardia, Jiang He, Robert C Kaplan, Nicholas L Smith, Donna K Arnett, David A Schwartz, Adolfo Correa, Mariza de Andrade, Xiuqing Guo, Barbara A Konkle, Brian Custer, Juan M Peralta, Hongsheng Gui, Deborah A Meyers, Stephen T McGarvey, Ida Yii-Der Chen, Benjamin C Shoemaker, Benjamin M Shoemaker, Patricia A Peyser, Jai G Broome, Stephanie M Gogarten, Fei Fei Wang, Quenna Wong, May E Montasser, Michelle Daya, Eimear E Kenny, Kari North, Lenore J Launer, Brian E Cade, Joshua C Bis, Michael H Cho, Jessica Lasky-Su, Donald W Bowden, L Adrienne Cupples, Angel CY Mak, Lewis C Becker, Jennifer A Smith, Tanika N Kelly, Stella Aslibekyan, Susan R Heckbert, Hemant K Tiwari, Ivana V Yang, John A Heit, Steven A. Lubitz, Stephen S Rich, Jill M Johnsen, Joanne E Curran, Sally Wenzel, Daniel E Weeks, Dabeeru C Rao, Dawood Darbar, Jee-Young Moon, Russell P Tracy, Erin J Buth, Nicholas Rafaels, Ruth JF Loos, Lifang Hou, Jiwon Lee, Priyadarshini Kachroo, Barry I Freedman, Daniel Levy, Lawrence F Bielak, James E Hixson, James S Floyd, Eric A Whitsel, Patrick Ellinor, Marguerite R Irvin, Tasha E Fingerlin, Laura M Raffield, Sebastian M Armasu, Jerome I Rotter, Marsha M Wheeler, Ester C Sabino, John Blangero, L. Keoki Williams, Bruce D Levy, Wayne Huey-Herng Sheu, Dan M Roden, Eric Boerwinkle, JoAnn E Manson, Rasika A Mathias, Pinkal Desai, Kent D Taylor, Andrew Johnson, Paul L Auer, Charles Kooperberg, Cathy C Laurie, Thomas W Blackwell, Albert V Smith, Hongyu Zhao, Ethan Lange, Leslie Lange, James G Wilson, Eric S Lander, Jesse M Engreitz, Benjamin L Ebert, Alexander P Reiner, Vijay G Sankaran, Sidd Jaiswal, Goncalo Abecasis, Pradeep Natarajan*, Sekar Kathiresan* on behalf of the NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium
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| Journal name for most current submission |
Nature
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| Associated TOPMed paper proposal | |
| This manuscript has been approved by the original paper proposal's Working Group(s) or is "single PI" |
This manuscript has been approved by the original paper proposal's Working Group(s) or is "single PI"
|
| Acknowledgments |
I have followed instructions for TOPMed Acknowledgments
|
| I've received approval for all data sets used in this manuscript, including adding new data sets and canceling all unused ones. |
I've received approval for all data sets used in this manuscript, including adding new data sets and canceling all unused ones.
|
| I have followed the Data Use Limitations for each of the data sets used in this manuscript, if applicable. |
Yes
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| I've included at least 1 co-author from each study used in analysis or the PI declined an offer to have their study represented. |
Yes
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| I certify that all co-authors have reviewed and approved the manuscript for submission. |
Yes
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| Upload all necessary study-specific approval documentation. | |
| I've included at least 1 DCC/ACC author, or they declined authorship or deemed acknowledgement sufficient. |
I have not
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| I’ve included at least 1 IRC author, or they declined authorship or deemed acknowledgement sufficient. |
I have not
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| I've included at least 1 author from relevant omics center(s) or they declined authorship or deemed acknowledgement sufficient. |
I have not
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TOPMed data used in this manuscript
The data set approvals listed here should match the TOPMed data used in this manuscript.
Don't see all the data sets you need? Request more data sets at any time.
Please "cancel" any data set requests that were not used in this manuscript. Note: only the paper proposal submitter or their designated updater can cancel data sets.
| Parent Study: Consent Group | Review Status |
|---|---|
| AFLMU:HMB-IRB-PUB-COL-NPU-MDS | Approved |
| ARIC:DS-CVD-IRB | Approved automatically after 2 weeks |
| ARIC:HMB-IRB | Approved automatically after 2 weeks |
| Amish:HMB-IRB-MDS | Approved automatically after 2 weeks |
| AustralianFamilialAF:HMB-NPU-MDS | Approved |
| BAGS:GRU-IRB | Approved automatically after 2 weeks |
| BioMe:GRU | Disapproved |
| BioMe:HMB-NPU | Approved |
| BioVU_AF:HMB-GSO | Approved automatically after 2 weeks |
| CAMP:DS-AST-COPD | Approved |
| CARDIA:HMB-IRB | Approved automatically after 2 weeks |
| CARDIA:HMB-IRB-NPU | Approved automatically after 2 weeks |
| CCAF:GRU-IRB | Approved |
| CFS:DS-HLBS-IRB-NPU | Approved automatically after 2 weeks |
| CHS:HMB-NPU-MDS | Approved |
| COPDGene:DS-CS-RD | Approved |
| COPDGene:HMB | Approved |
| CRA:DS-ASTHMA-IRB-MDS-RD | Approved automatically after 2 weeks |
| DECAF:GRU | Approved |
| DHS:DS-DHD-IRB-COL-NPU | Approved |
| DHS:HMB-IRB-COL-NPU | Approved |
| ECLIPSE:DS-CS-MDS-RD | Approved |
| EOCOPD:DS-CS-RD | Approved |
| FHS:HMB-IRB-MDS | Approved automatically after 2 weeks |
| FHS:HMB-IRB-NPU-MDS | Approved automatically after 2 weeks |
| GALAI:DS-LD-IRB-COL | Approved |
| GALAII:DS-LD-IRB-COL | Approved |
| GCPD-A:GRU | Disapproved |
| GENOA:DS-ASC-RF-NPU | Approved |
| GGAF:GRU | Approved |
| GOLDN:DS-CVD-IRB | Approved |
| GenSalt:GRU-IRB | Approved automatically after 2 weeks |
| GeneSTAR:DS-CVD-IRB-NPU-MDS | Approved |
| HCHS_SOL:HMB | Approved automatically after 2 weeks |
| HCHS_SOL:HMB-NPU | Approved automatically after 2 weeks |
| HVH:DS-CVD-IRB-MDS | Approved automatically after 2 weeks |
| HVH:HMB-IRB-MDS | Approved automatically after 2 weeks |
| HyperGEN:DS-CVD-IRB-RD | Approved |
| HyperGEN:GRU-IRB | Approved |
| INSPIRE_AF:DS-MULTIPLE_DISEASES-MDS | Approved automatically after 2 weeks |
| IPF:DS-ILD-IRB-NPU | Disapproved |
| IPF:DS-LD-IRB-NPU | Disapproved |
| IPF:DS-PFIB-IRB-NPU | Disapproved |
| IPF:DS-PUL-ILD-IRB-NPU | Disapproved |
| IPF:HMB-IRB-NPU | Approved |
| JHS:DS-FDO-IRB | Approved |
| JHS:DS-FDO-IRB-NPU | Approved |
| JHS:HMB-IRB | Approved |
| JHS:HMB-IRB-NPU | Approved |
| JHU_AF:HMB-NPU-MDS | Approved automatically after 2 weeks |
| MESA:HMB | Approved |
| MESA:HMB-NPU | Approved |
| MGH_AF:DS-AF-IRB-RD | Approved automatically after 2 weeks |
| MGH_AF:HMB-IRB | Approved automatically after 2 weeks |
| MLOF:HMB-PUB | Approved automatically after 2 weeks |
| Mayo_VTE:GRU | Approved |
| OMG_SCD:DS-SCD-IRB-PUB-COL-MDS-RD | Approved |
| PMBB_AF:HMB-IRB-PUB | Approved automatically after 2 weeks |
| PUSH_SCD:DS-SCD-IRB-PUB-COL | Disapproved |
| Partners:HMB | Approved automatically after 2 weeks |
| PharmHU:DS-SCD-RD | Approved automatically after 2 weeks |
| PharmHU:HMB | Approved automatically after 2 weeks |
| REDS-III_Brazil:GRU-IRB-PUB-COL-NPU | Approved automatically after 2 weeks |
| SAFS:DS-DHD-IRB-PUB-MDS-RD | Approved |
| SAGE:DS-LD-IRB-COL | Approved |
| SAPPHIRE_asthma:HMB-COL | Disapproved |
| SAPPHIRE_asthma:HMB-IRB | Approved automatically after 2 weeks |
| SARP:GRU | Approved automatically after 2 weeks |
| Samoan:GRU-IRB-PUB-COL-NPU-GSO | Approved |
| Sarcoidosis:DS-SAR-IRB | Approved |
| THRV:DS-CVD-IRB-COL-NPU-RD | Approved automatically after 2 weeks |
| VAFAR:HMB-IRB | Approved automatically after 2 weeks |
| VU_AF:GRU-IRB | Approved automatically after 2 weeks |
| WGHS:HMB | Approved automatically after 2 weeks |
| WHI:HMB-IRB | Approved |
| WHI:HMB-IRB-NPU | Approved |
| miRhythm:GRU | Approved automatically after 2 weeks |
| walk_PHaSST:DS-SCD-IRB-PUB-COL-NPU-MDS-RD | Approved automatically after 2 weeks |
| walk_PHaSST:HMB-IRB-PUB-COL-NPU-MDS-GSO | Approved |
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