find-tfbs: a tool to identify functional non-coding variants associated with complex human traits using open chromatin maps and phased whole-genome sequences
| Submitting Author |
Lettre, Guillaume
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|---|---|
| Submitting Author's Email | |
| Authors |
Sébastian Méric de Bellefon1,2,*, Florian Thibord3, Paul L. Auer4, John Blangero5, Zeynep H Coban-Akdemir6, James S. Floyd7, Myriam Fornage8, Jill M. Johnsen9,10, Leslie A. Lange11, Joshua P. Lewis12, Rasika A. Mathias13, Caitlin P. McHugh14, Jee-Young Moon15, Alex P. Reiner16, Adrienne M. Stilp14, NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium#, Guillaume Lettre1,2,*
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| Journal name for most current submission |
Bioinformatics
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| Associated TOPMed paper proposal | |
| This manuscript has been approved by the original paper proposal's Working Group(s) or is "single PI" |
This manuscript has been approved by the original paper proposal's Working Group(s) or is "single PI"
|
| Acknowledgments |
I have followed instructions for TOPMed Acknowledgments
|
| I've received approval for all data sets used in this manuscript, including adding new data sets and canceling all unused ones. |
I've received approval for all data sets used in this manuscript, including adding new data sets and canceling all unused ones.
|
| I have followed the Data Use Limitations for each of the data sets used in this manuscript, if applicable. |
Yes
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| I've included at least 1 co-author from each study used in analysis or the PI declined an offer to have their study represented. |
Yes
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| I certify that all co-authors have reviewed and approved the manuscript for submission. |
Yes
|
| Upload all necessary study-specific approval documentation. | |
| I've included at least 1 DCC/ACC author, or they declined authorship or deemed acknowledgement sufficient. |
I've included at least 1 DCC/ACC author, or they declined authorship or deemed acknowledgement sufficient.
|
| I’ve included at least 1 IRC author, or they declined authorship or deemed acknowledgement sufficient. |
I’ve included at least 1 IRC author, or they declined authorship or deemed acknowledgement sufficient.
|
| I've included at least 1 author from relevant omics center(s) or they declined authorship or deemed acknowledgement sufficient. |
I've included at least 1 author from relevant omics center(s) or they declined authorship or deemed acknowledgement sufficient.
|
TOPMed data used in this manuscript
The data set approvals listed here should match the TOPMed data used in this manuscript.
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Please "cancel" any data set requests that were not used in this manuscript. Note: only the paper proposal submitter or their designated updater can cancel data sets.
| Parent Study: Consent Group | Review Status |
|---|---|
| ARIC:DS-CVD-IRB | Approved automatically after 2 weeks |
| ARIC:HMB-IRB | Approved automatically after 2 weeks |
| Amish:HMB-IRB-MDS | Approved automatically after 2 weeks |
| CARDIA:HMB-IRB | Approved automatically after 2 weeks |
| CARDIA:HMB-IRB-NPU | Approved automatically after 2 weeks |
| CHS:DS-CVD-MDS | Approved |
| CHS:DS-CVD-NPU-MDS | Approved |
| CHS:HMB-MDS | Approved |
| CHS:HMB-NPU-MDS | Approved |
| FHS:HMB-IRB-MDS | Approved |
| FHS:HMB-IRB-NPU-MDS | Approved |
| GenSalt:DS-HCR-IRB | Approved automatically after 2 weeks |
| GeneSTAR:DS-CVD-IRB-NPU-MDS | Approved |
| HCHS_SOL:HMB | Approved automatically after 2 weeks |
| HCHS_SOL:HMB-NPU | Approved automatically after 2 weeks |
| JHS:DS-FDO-IRB | Approved |
| JHS:DS-FDO-IRB-NPU | Approved automatically after 2 weeks |
| JHS:HMB-IRB | Approved |
| JHS:HMB-IRB-NPU | Approved |
| MESA:HMB | Approved |
| MESA:HMB-NPU | Approved |
| SAFS:DS-DHD-IRB-PUB-MDS-RD | Approved |
| WHI:HMB-IRB | Approved |
| WHI:HMB-IRB-NPU | Approved |
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